地质微生物和地质碳封存：

1）土壤和地下水污染及修复过程中的生物地球化学机制及反应迁移行为

2）微流控和数值模拟研究孔隙尺度二氧化碳驱油封存、咸水层碳封存、玄武岩碳封存

《地质微生物学》

微生物积极参与并深刻地影响着地球表层各圈层的形成和演变。本课程着重介绍微生物的生长和演化过程、微生物代谢过程和能量传递过程、微生物参与的地球元素循环和地质过程。学生通过本课程的学习将掌握微生物学的基本原理、明确当前地质微生物研究热点、了解地质微生物的研究方法。

(8)国家自然科学基金面上项目，基于微流控技术的超临界CO2-水-岩地球化学反应的尺度效应研究，2023-2026，在研，主持

(7)江苏省科技厅，江苏地区二十万吨级CCUS重大科技示范科研项目，2022-2025，在研，参加

(6)江苏省“双创计划”高校创新项目，2021-01至2023-12，在研，主持

(5)科技部国家重点研发（课题四）,场地土壤-水污染多介质组合技术优化协同整治机制与验证，2020-2024，在研，参加

(4)科技部国家重点研发（课题二）,有色金属矿区地下水重金属运移模拟及污染通量量化，2020-2023，在研，主持

(3)国家自然科学基金重大项目，“新生代大陆风化调控机制”第一课题“构造稳定区大陆风化动力学研究究”，2020-2024在研，参加

(2)国家自然科学基金面上项目，土壤-地下水环境微生物群落对铬迁移转化的影响机制和模型研究，2018-2021，已结题，主持

(1)美国地质勘探局(USGS), Illinois State Water Resources Research Institute Program, Attachment and transport mechanisms of Cryptosporidium parvumoocysts in subsurface environments: A multi-scale study, 2009-2010，已结题，共同主持

(51) Ma T., Deng H., Kang P., Feng Y., Yang X., Zhao L., Li X., Wang D., Chen X., Yang Z., Qiu W., Ji J., Liu Y.† “Flow-driven regulation of CaCO₃ precipitation and fracture evolution in heterogeneous fractures”, Geochimica et Cosmochimica Acta, 2026, 419, 225-240.

(50) Ren J., Wang J., Dong Y., Xiao L., Wang L., Ji J., and Liu Y.† “Microbial community dynamics and its relationship with biogeochemical processes under geochemical perturbations”, Water Research, 2026, 289, 124889.

(49) Cheng L., Ding Y., Liu Y., Chen J., Wu X., Liu J., Wang L., and Sheng A. † “Pore-Size-Dependent Kinetics and Product Distribution of Fe(II)-Catalyzed Ferrihydrite Transformation”, Environmental Science & Technology, 2025, 59, 12667-12678.

(48) 强春梅，倪鑫鑫，吴吉春，徐芬，刘媛媛*.“基于AHP-TOPSIS 的石化聚集区组合修复技术筛选方法及工程应用研究”，环境工程，2025, 43(1): 211-222.

(47) 黄鸿蓝，宋健，杨蕴，吴剑锋，刘媛媛，吴吉春，“三维裂隙网络中典型重金属污染物反应运移数值模拟”，地球科学，2024,49(8):2879-2890.

(46) Liu Y., Zhang L., Wen Y., Zhai H., Yuan Y., Guo C., Wang L., Wu F., Liu C., Xiao J., Liu J., Yang X., Cai Y., Ji J., and Liu Y.† “A kinetics-coupled multi-surface complexation model deciphering arsenic adsorption and mobility across soil types”, Science of the total Environment, 2024, 948, 174856.

(45) Nie M., Li X., Ding Y., Pan Y., Cai Y., Liu Y., and Liu J.† “Effect of stoichiometry on nanomagnetite sulfidation”, Environmental Science & Technology, 2023, 57, 3002-3011.

(44) Li T., Chen T.†, Robinson L. F., Wang M., Li G., Liu Y., and Knowles T. D. J. “Early diagenetic imprints and U–Th isotope systematics of fossil land snail shells from the Chinese Loess Plateau”, Quaternary Geochronology, 2023, 74, 101417.

(43) Yuan Y., Chen T. †, Zhang F., Liu Y., Xiong G., Wei G., Dahl T., Yan W., Ling H., Cheng H., and Shen S. “Substantial incorporation of isotopically heavy reduced U species into marine carbonate sediments”, Geochimica et Cosmochimica Acta, 2023, 358: 27-37.

(42) Thaiyal Nayahi N., Ou B., Liu Y., and Janjaroen D.† “Municipal solid waste sanitary and open landfills: Contrasting sources of microplastics and its fate in their respective treatment systems”, Journal of Cleaner Production, 2022, 380, 135095.

(41) Qiang S., Shi X.†, Revil A., Kang X., Liu Y., and Wu J. “Residual NAPL morphology effects on electrical resistivity: insights from micromodel displacement experiments and pore network simulations”, Water Resources Research, 2022, 58, e2022WR033233.

(40) Ganesan S., Limphattharachai S., Chawengkijwanich C., Liu Y., and Janjaroen D.† “Influence of salinity on biofilm formation and COD removal efficiency in anaerobic moving bed biofilm reactors”, Chemosphere, 2022, 304, 135229.

(39) Wang M., Xu K., Li T., Robinson L. F., Liu Y., Shao Q., Li G., and Chen T.† “The mineralization and early diagenesis of deep-sea coral Madrepora oculate”, Chemical Geology, 2022, 606, 120966.

(38) Wang M., Chen T., Feng D., Zhang X., Li T., Robinson L. F., Liang Q., Bialik O. M., Liu Y., and Makovsky Y.† “Uranium-thorium isotope systematics of cold-seep carbonate and their constraints on geological methane leakage activities”, Geochimica et Cosmochimica Acta, 2022, 320, 105-121.

(37) Song J., Zeng, Y., Liu Y., Jiang W.†, "Retention of graphene oxide and reduced graphene oxide in porous media:  Diffusion-attachment, interception-attachment and straining", Journal of Hazardous Materials, 2022, 431, 128635.

(36) Ganesan S., Limphattharachai S., Chawengkijwanich C., Liu Y., Janjaroen D.†, "Influence of salinity on biofilm formation and COD removal efficiency in  anaerobic moving bed biofilm reactors" Chemosphere, 2022, 304, 135229.

(35) Ren J., Liu Y., Cao W., Zhang L., Xu F., Liu J., Wen Y., Xiao J., Wang L., Zhuo X., Ji J., Liu Y.†, "A process-based model for describing redox kinetics of Cr(VI) in natural sediments containing variable reactive Fe(II) species",Water Research, 2022,  225, 119126.

(34) Xiao J., Chen W., Wang L., Zhang X., Wen Y., Bostick B. C., Wen Y., He X., Zhang L., Zhuo X., Huang K., Wang N., Ji J., Liu Y.†, "New strategy for exploring the accumulation of heavy metals in soils derived from different parent  materials in the karst region of southwestern China",  Geoderma, 2022, 417, 115806.

(33) 冯一夫,廖启林,季文兵,任静丽,季峻峰,杨忠芳,卓小雄,王磊,刘媛媛*. “广西岩溶区土壤铁锰结核重金属富集的地质特征”,高校地质学报, 2022, 28(6): 787-798.

(32) 马腾飞, 杨玉容, 施小清, 杨晓帆†，刘媛媛†, "双重裂隙介质内微观粒子测速研究", 水动力学研究与进展， 2022, 37(2), 269-275.

(31) 刁文钦，宋健，王琳，吴剑锋，刘媛媛，吴吉春，“利用生物渗透性反应墙修复地下水Cr(VI)污染的数值模拟”，中国环境科学，2022, 42(7): 3234-3243.

(30) Yang X.†, Sun H., Yang Y., Liu Y., Yang X., “Recent progress in multi‐scale modeling and simulation of flow and solute transport in porous media”,  Wiley Interdisciplinary Reviews: Water, 2021, DOI:10.1002/wat2.1561.

(29) 刘媛媛†，马腾飞，陈旸，杨晓帆，刘崇炫，“表生地球化学反应的尺度效应”， 矿物岩石地球化学通报， 2021，doi:10.19658/j.issn.1007-2801.2021.40.061.

(28) Zhang L., Xiao J., Ji J., Liu Y.†, “Arsenate adsorption on different fractions of iron oxides in the paddy soil from the karst region of China”, Bulletin of Environmental Contamination and Toxicology, 2021, 106, 126-133.

(27) Kang Z.†, Chen J., Yuan D., He S., Li Y., Chang Y., Deng Y., Chen Y., Liu Y., Jiang G., Wang X., Zhang Q., “Promotion function of forest vegetation on the water & carbon coupling cycle in karst critical zone: insights from karst groundwater systems in South China” Journal of Hydrology, 2020, 590, 125246.

(26) Song J., Wang Q., Zeng Y., Liu Y., Jiang W.†, “Deposition of protein-coated multi-walled carbon nanotubes on oxide surfaces and the retention in a silicon micromodel”, Journal of Hazardous Materials, 2019, 375: 107-114.

(25) Yang C., Zheng F., Liu Y., Zhang Y., Liu W., Zhang Q., Yang X.†“Modeling hydro-biogeochemical transformation of chromium in hyporheic zone: Effects of spatial and temporal resolutions” Journal of Hydrology, 2019, 579: 124152. 

(24) Zhou C., Liu Y., Liu C.†, Liu Y., Tfaily M. “Compositional Changes of Dissolved Organic Carbon during its Dynamic Desorption from Hyporheic Zone Sediments” Science of The Total Environment, 2019, 658: 16-23.

(23) Yang C., Zhang Y., Liu Y., Yang X., Liu C.†, “Model-Based Analysis of the Effects of Dam-Induced River Water and Groundwater Interactions On Hydro-Biogeochemical Transformation of Redox Sensitive Contaminants in a Hyporheic Zone”, Water Resources Research, 2018, 54: 5973-5985.

(22) Nelson K. L.†, Boehm A. B., Davies-Colley. R. J., Dodd M. C., Kohn T., Linden K. G., Liu Y., Maraccini P. A., McNeill K., Mitch W. A., Nguyen T. H., Parker K. M., Rodriguez R. A., Sassoubre L. M., Silverman A. I., Wigginton K. R., and Zepp R. G. “Sunlight-mediated Inactivation of Health-relevant Microorganisms in Water: A Review of Mechanisms and Modeling Approaches”, Environmental Science: Processes & Impacts, 2018, 20: 1089-1122.

(21) Huang K., Liu Y., Yang C., Duan Y., Liu C.†, “Identification of Hydro-Biogeochemical Processes Controlling Seasonal Variations in Arsenic Concentrations within a Riverbank Aquifer at Jianghan Plain, China”, Water Resources Research, 2018, 54: 4294-4308.

(20) Xu F., Liu Y.*, and Liu C.†, “A Generalized-Rate Model for Describing and Scaling Redox Kinetics in Sediments Containing Variable Redox-Reactive Materials”, Environmental Science & Technology, 2018, 52(9), 5268-5276.

(19) Yan A., Liu C.†, Liu Y., and Xu F., “Effect of Ion Exchange on the Rate of Aerobic Microbial Oxidation of Ammonium in Hyporheic Zone Sediments”, Environmental Science and Pollution Research, 2018, 25: 8880-8887.

(18) Liu Y., Liu C.†, Nelson W., Liang S., Xu F., Liu Y., Yan A., Zhong L., Thompson C., Fredrickson J., and Zachara J., “Effect of Water Chemistry and Hydrodynamics on Nitrogen Transformation Activity and Microbial Community Functional Potential in Hyporheic Zone Sediment Columns”, Environmental Science & Technology, 2017, 51(9), 4877-4886.

(17) Liu Y., Xu F.*, and Liu C.†, “Coupled Hydro-Biogeochemical Processes Controlling Cr Reductive Immobilization in Columbia River Hyporheic Zone”, Environmental Science & Technology, 2017, 51(3), 1508-1517. (Editor’s Choice)

(16) Xu F., Liu Y.†, Zachara J., Bowden M., Kennedy D., Plymale A., and Liu C.†, “Redox Transformation and Reductive Immobilization of Cr(VI) in the Columbia River Hyporheic Zone Sediments”, Journal of Hydrology, 2017, 555, 278-287.

(15) Yan Z., Liu C.†, Liu Y., Bailey V., “Multiscale Investigation on Biofilm Distribution and its Impact on Macroscopic Biogeochemical Reaction Rates”, Water Resources Research, 2017, 53: 8698-8714.

(14) Li M, Gao Y., Qian W., Shi L., Liu Y., Nelsonb W., Nicorab C., Resch C., Thompson C., Yan S., Fredrickson J., Zacharab J., and Liu C.†, “Targeted Quantification of Functional Enzyme Dynamics in Environmental Samples for Microbially Mediated Biogeochemical Processes”, Environmental Microbiology Reports, 2017, 9(5): 512-521.

(13) Yan Z., Liu C.†, Todd-Brown K. E., Liu Y., Bond-Lambert B., Bailey V., “Pore-scale Investigation on the Response of Heterotrophic Respiration to Moisture Conditions in Heterogeneous Soils”, Biogeochemistry, 2016, 131(1): 121-134.

(12) Yan S., Liu Y., Liu C.†, Shi L., Shang J., Shan H., Zachara J., Fredrickson J., Kennedy D., Resch C., Thompson C. and Fansler S., “Nitrate Bioreduction in Redox-Variable Low Permeability Sediments”, Science of the Total Environment, 2016, 539: 185-195.

(11) Liu Y., Liu C.†, Kukkadapu R., McKinley J., Zachara J., Plymale A., Miller M., Varga T. and Resch C., “⁹⁹Tc(VII) Retardation, Reduction, and Redox Rate Scaling in Naturally Reduced Sediments”, Environmental Science & Technology, 2015, 49(22): 13403-13412. 

(10) Liu Y., Liu C.†, Zhang C., Yang X. and Zachara J. M., “Pore and Continuum Scale Study of the Effect of Subgrid Transport Heterogeneity on Redox Reaction Rates”, Geochimica et Cosmochimica Acta, 2015, 163: 140-155.

(9) Liu Y.†, Dong S., Kuhlenschmidt M. S., Kuhlenschmidt T. B., Drnevich J. and Nguyen, T. H.,“Inactivation Mechanisms of Cryptosporidium parvum Oocysts by Solar Ultraviolet Irradiation”,Environmental Science: Water Research & Technology, 2015, 1: 188-198.

(8) Liu C.†, Liu Y., Kerisit S. and Zachara J., “Pore Scale Process Coupling and Effective Surface Reaction Rates in Heterogeneous Subsurface Materials”, Reviews in Mineralogy and Geochemistry, 2015, 80: 191-216.

(7) Zhong, L.†, Szecsody J., Truex M., Williams M., and Liu Y., “Ammonia gas transport and reactions in unsaturated sediment: Implications for use as an amendment to immobilize inorganic contaminants”. Journal of Hazardous Material, 2015,289: 118-129.

(6) Liu Y., Zhang C., Hu D., Kuhlenschmidt M. S., Kuhlenschmidt T. B., Mylon S. E., Kong R., Bhargava, R. and Nguyen, T. H.†,“Role of Collector Alternating Charged Patches on Transport of Cryptosporidium Parvum Oocysts in a Patchwise Charged Heterogeneous Micromodel”, Environmental Science & Technology, 2013, 47(6): 2670-2678.

(5) Pan G.†, Dan W., and Liu Y., “Photocatalytic degradation pathways and adsorption modes of H-acid in TiO₂suspensions”, Chinese Science Bulletin, 2012, 57(10): 1102-1108.

(4) Liu Y., Zhang C., Hilpert M., Kuhlenschmidt M. S., Kuhlenschmidt T. B. and Nguyen, T. H.†, “Transport of Cryptosporidium Parvum Oocysts in a Silicon Micromodel”, Environmental Science & Technology, 2012, 46(3): 1471-1479.

(3) Liu Y., Kuhlenschmidt M. S., Kuhlenschmidt T. B. and Nguyen, T. H.†,“Composition and Conformation of Cryptosporidium Parvum Oocysts WallSurface Macromolecules and Their Effect on Adhesion Kinetics of Oocysts on Quartz Surface”, Biomacromolecules,2010, 11(8): 2109-2115.

(2) Janjaroen D., Liu Y., Kuhlenschmidt M. S., Kuhlenschmidt T. B. and Nguyen, T. H.†,“Role of Divalent Cations on Deposition Kinetics of Cryptosporidium parvum Oocysts on Natural Organic Matter Surfaces”,Environmental Science & Technology, 2010, 44(12): 4519-4524.

(1) Liu Y., Janjaroen D., Kuhlenschmidt M. S., Kuhlenschmidt T. B. and Nguyen, T. H.†,“Deposition of Cryptosporidium ParvumOocysts on Natural Organic Matter Surfaces: Microscopic Evidence for Secondary Minimum Deposition in a Radial Stagnation Point Flow Cell”, Langmuir, 2009, 25: 1594-1605.

ORCID：

2021年获“第18届侯德封矿物岩石地球化学青年科学家奖”

2017年入选“国家重大人才工程A类青年项目”